spirepy.cli.view¶

Functions¶

view(item, target)

View a SPIRE item.

Module Contents¶

spirepy.cli.view.view(item: spirepy.study.Study | spirepy.sample.Sample, target: str)[source]¶

View a SPIRE item.

Parameters:

item (spirepy.sample.Sample or spirepy.study.Study) – The item to be viewed (spirepy.sample.Sample or spirepy.study.Study).
target (str) – What you want to view (metadata, antibiotic resistance annotations, manifest)